Changelog

Change Log

This document records the main changes to the tree code.

4.0.6 (03-08-2024)

• Initial IPL-4 config

• New or Updated paths for IPL-3

4.0.5 (11-29-2023)

• Adding tilegrp to LVM DRP paths

4.0.4 (11-21-2023)

• Adding LVM guider frames to sdsswork

4.0.3 (11-02-2023)

• Adding new IPL-3 config and paths

4.0.2 (2023-07-25)

• Adding new paths for main LVM data products

4.0.1 (2023-07-13)

• Change to LVM path template for master frames; consolidates master paths into one template

4.0.0 (2023-06-01)

• General refactor and cleanup of the tree configs

• Removes MaNGA internal mpl configs

• Removes bosswork and sdsswork configs

• Renames sdss5 config to sdsswork, making sdss5 the default work setup

• Module creation creates a sdss5 module symlink to sdsswork

3.1.7 (2023-05-31)

• Tag before package cleanup and refactor

• Adds some initial paths for LVM DRP

• Updates confSummmary config paths for sdsscore

3.1.6 (2023-03-27)

• Fixing dr18 mos target envvar bug to MOS_TARGET

• Adding SDSS_HIPS envvar and moc path to sdss5 config

3.1.5 (2023-03-01)

• Added new config for IPL-2

• Make sdsstool and sdss_access module dependencies optional in setup_tree

3.1.4 (2022-11-29)

• Adding new config for IPL-1

• Updating many paths within sdss5.cfg

3.1.3 (2022-06-23)

• Add methods identify_envvar and identify_section to Tree class.

3.1.2 (2022-05-13)

• Includes updates and changes to sdss5 paths and envvars

3.1.1 (2021-12-05)

• Added missing MANGA_SPECTRA_TEMPLATES to dr15 config.

3.1.0 (2021-09-24)

• Updating tree config for dr17 VACs

• Added new Sphinx doc page for computing changes in the tree

• Adds release_date to tree configs for DR and MPLs. Unreleased configs have release_date set to None.

• Adds new release_date property to Tree which returns the release date as a datetime.date object.

• Expanding Tree.list_available_configs to sort by “DR”, “MPL” and “IPL”.

• Deprecating Tree.list_configs in favor of Tree.list_available_configs

3.0.7 (2020-03-05)

• Added method get_release_from_config to convert a given tree config_name into its release name.

• Added a new release attribute, accessible on a Tree instance.

• Fixing the mangarss path template with proper “wave” keyword arg, similar to mangacube

• Adding new tree config for MaNGA release MPL-11

3.0.6 (2020-11-11)

• Added dr17 release config

• Added tree_version to bin, expected by some old/existing IDL product tags

• Updated the path syntax for special functions to “@[function_name]|” to resolve issues with inclusion next to other characters

• Added new sdss5 paths for apogee

• Changed sdss5 paths for apogee from sdss4 to handle healpix grouping and simplified kwargs with special functions

• Updating the code to write out old sdss_paths.ini file.

• Added preserve_envvars options to replant_tree to preserve users original environment variables

3.0.5 (2020-07-17)

• Added MaNGA MPL-10 release config

• Added new paths for DR16+; VACs for APOGEE_JOKER

3.0.4 (2020-06-04)

• Added phase property to python tree. Tracks phase of current ‘sdsswork’ environment.

• Modified module setup to create “default” symlink for lua modules

• Added write_old_paths_inifile method to generate a version of the old sdss_paths.ini file

• Adding new paths for DR16+; VACs for EBOSS_LSS, ATLAS, SPECTRO_LENSING, BOSS_QSO

3.0.3 (2020-05-29)

• Removed specific version requirement 1.0.0 for sdss_access in module setup

3.0.2 (2020-05-21)

• Added correct path for DR9 PHOTOSWEEPS

• Corrected APOGEE_ASTRONN path in DR16

• Added BCAM_DATA_2S to DR16

3.0.1 (2020-05-21)

• Added prereqs to tree module files for sdss_access/1.0.0 and sdsstools/0.1.7

3.0.0 (2020-05-07)

• Major changes to environment configuration files

• Incompatible with 2.x versions

• Implements versioning of DR config files and sdss_access paths

• Each config file now inherits from another config file using base keyword.

• Each DR config now only contains new or modified definitions for that DR.

• New configs for internal releases can now be created, e.g. mpl9.cfg.

• Explicit case is recognized for environment names and tree ini sections

• Deprecated and Removed sdss_paths.ini file

• New PATHS ini section in environment config files defines sdss_access paths

• Symbol for “special function” path definition has changed from % to @

• Refactored compute_changelog function to return dictionary and compute PATHS differences

• Added changelog compute functions compute_environment_changes, and compute_path_changes.

• Added changelog print functions print_environment, and print_paths.

• Moved tests out of tree python package to top level.

• Deprecated included logger and config in favor of sdsstools logger and config.

• Simplified python package setup.cfg and consolidated requirements files

2.15.10 (2020-04-13)

Added

• new function compute_changelog to print difference between two tree environments

• new sphinx documentation on all DR tree environments and environment changes between DRs

Changed

• added wave keyword to mangacube/rss paths to handle LOG/LIN switch

• updated Tree python code to handle new cfg inheritance and versioning

2.15.9 (2020-03-16)

Fixed

• standardized case output for get_available_releases method. Added public only option.

2.15.8 (2020-03-15)

Added

• new method list_available_configs that lists the available config files to load with Tree

• new method get_available_releases that builds a list of data releases from the config files

Fixed

• Issue #11 - silence and no input when multiple module paths found

2.15.7 (2019-12-06)

Added

• new path definitions for MaNGA VAC Visual Morphology

• new path definition for MaNGA VAC Galaxy Zoo

• new path definitions for MaNGA VAC Firefly

• new path definitions for MaNGA VAC GEMA

• new documentation for adding new paths into sdss_paths.ini

• config file for DR16

Fixed

• Issue #10 - bug fix in setup_tree.py

2.15.6 (2019-07-26)

Refactored

• Modified data/cfg structure to handle versioning of envvar and path definitions

  • data cfg files now inherit from one another

  • deprecated sdss_paths.ini file and moved into new PATHS section in individual cfg files

Added

• new temporary path for manga images for releases MPL-8 and up

• new method show_forest to display the environment for configs not currently loaded

• new method list_configs to show all available configs for loading

• new tests for setting up the tree; creating and copying module/bash files and env symlinks

• added the option for env symlink creation into the setup_tree.py bin file

• added option to specify default config to write into .version file

Changed

• replaced non-existent %designdir special function with %definitiondir

• changed yaml loaded to use yaml.FullLoader in compliance with pyyaml 5.1

• switching disutils.StrictVersion to more standard parse_version

Fixed

• Broken syntax on apogee in paths.ini file

• Broken syntax in some platelist definitions

• Broken etc/Makefile after implementation of new setup_tree.py

• Bugfix on setup_tree.py when empty tree directory first entry in MODULEPATH

2.15.5 (2018-09-06)

Changed

• Refactored bin/setup_tree to install module files

2.15.4 (2018-07-09)

Changed

• Wrapped config file opens in with to ensure proper file closure

Fixed

• Bug when config=None is explicitly passed into Tree

2.15.3 (2017-12-02)

Added

• method to list_keys

• ability to load different config files

• ability to load a new section of the tree in an existing environment

• new documentation

• new sphinx plugin to auto document the tree config

Changed

• Moved camelCase methods to underscore methods

2.15.2 (2017-11-29)

Added

• Synced a bunch of new config changes from svn that were forgotten.

2.15.1 (2017-11-29)

Changed

• Added Tree import in init for easier imports from top level

2.15.0 (2017-11-29)

Fixed

• Fixed setup to include data files

• Updated versioning to sync with svn tags

0.1.0 (2017-11-29)

Added

• Created new tree python product using the cookiecutter template

• A python form of Tree to load SDSS environments